PHD Scholarship opportunity: Investigating the impact of agronomic factors on the microbiome of Horticultural produce –‘Meta-Hort’.

PhD PHD Scholarship opportunity: Investigating the impact of agronomic factors on the microbiome of Horticultural produce –‘Meta-Hort’.

Deadline: 1 August 2022 or until position is filled

I. Background

Fruits and vegetables contain a diverse community of microbes (microbiome) which play a significant role  in  plant  health  and  subsequently  human  health.  These  microbes  have  a  myriad  of  functions including flavour development, ripening and health through the production of secondary metabolites. Much attention has been paid to the role single classes of secondary metabolites such as polyactylenes and  glucosinolates  play  in  gut  health,  less  attention  has  been  dedicated  to  the  role  the  whole  crop microbiome plays on gut health and particularly the impact agronomic practices, such ripening stage of the  crop  when  harvested,  storage,  packaging  and  the  impact  this  has  on  the  crop  microbiome  itself.

 

Within the Meta-Hortproject, the impact of early harvesting and tray ripening of commonly imported produce will be investigated and compared to Irish grown produce. Key indicators, such as the impact of harvesting, variety and agronomy on the crop microbiome, the prebiotic and probiotic potential of the fruit, and its resultant impact on metabolic pathways will be investigated. In vitro gut models will be used to infer the potential resulting impact on gut health. The use of these models will allow for an assessment of agronomic approach for the optimisation of beneficial outcomes for the consumer.

II. Benefits

  • The scholarship funding is €24,000per  annum  and  includes University  fees of  up  to  a  maximum  of €6,000 per annum and is tenable for 4years.
  • The successful candidate will primarily be based in the Food Biosciences Department in Teagasc, Moorepark under the supervision of Dr Orla O’Sullivan with separate tasks to be completed under the supervision of Dr  Caitriona  Guinane  at the  Department  of  Biological  Sciences, Munster  Technological University, Cork Campusand Dr Michael Gaffney at the Teagasc HorticulturalDevelopment Department, Ashtown, Dublin 15.
  • The  student  will have  the  opportunity  to  develop  his/her  skills  in  a  broad  range  of  areas,  including laboratory skills in microbiology, DNA sequencing technologies, simulated gut models and bioinformatic analysis.
  • Some experience or knowledge of horticultural crops would also be of benefit.
  • Experience will also be gained in management assessment, data management and analysis, writing and publishing peer-reviewed  scientific  papers,  and  networking  with  experts  in  the  field. 
  • The  student  will  also  have  the opportunity  to  attend  and  present  research  findings  at  (inter)national  conferences.
  • This  position  will allow the candidate the opportunity to work at Ireland’s leading agricultural research organisation, attain a PhD from a well-recognised Irish University, to gain a skillset and qualification that will equip them  for  a  wide  variety  of  future  careers,  and  to  significantly  contribute  to  the  improvement  of the understanding of agronomy on the microbiome of fruit and vegetables.

III. Requirements

  • Applicants should have a primary degree (minimum 2.1) in an appropriate discipline (Biological sciences, Biotechnology,  horticulture  or  plant  biology or  equivalent). 
  • A Master’sdegree  would  be  a  distinct advantage. The successful candidate should have an ability to work independently to a schedule, and a demonstrated  capability  in  the  delivery  of  research  projects  at  undergraduate  level. 
  • The  successful candidate should have excellent verbal and written communication skills, high levels of initiative, self-management,  achievement  orientation  and  motivation.
  • For  applicants  whose  first  language  is  not English,  requirements  are  outlined here
  • Students  should  indicate  in  their  application  if  they  have already completed an English language proficiency test and submit supporting documentation

IV. How to Apply?

Submit an electronic copy of Curriculum Vitae and a cover letter/ letter of motivation to both Dr Caitriona Guinane ([email protected]) and Dr Michael Gaffney ([email protected])

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